Pylint report from report.jinja2

Useless option value for '--disable', 'print-statement' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'parameter-unpacking' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'unpacking-in-except' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'old-raise-syntax' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'backtick' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'import-star-module-level' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'apply-builtin' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'basestring-builtin' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'buffer-builtin' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'cmp-builtin' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'coerce-builtin' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'execfile-builtin' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'file-builtin' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'long-builtin' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'raw_input-builtin' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'reduce-builtin' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'standarderror-builtin' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'unicode-builtin' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'xrange-builtin' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'coerce-method' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'delslice-method' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'getslice-method' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'setslice-method' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'no-absolute-import' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'old-division' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'dict-iter-method' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'dict-view-method' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'next-method-called' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'metaclass-assignment' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'indexing-exception' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'raising-string' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'reload-builtin' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'oct-method' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'hex-method' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'nonzero-method' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'cmp-method' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'input-builtin' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'round-builtin' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'intern-builtin' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'unichr-builtin' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'map-builtin-not-iterating' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'zip-builtin-not-iterating' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'range-builtin-not-iterating' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'filter-builtin-not-iterating' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'using-cmp-argument' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'div-method' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'idiv-method' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'rdiv-method' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'exception-message-attribute' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'invalid-str-codec' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'sys-max-int' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'bad-python3-import' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'deprecated-string-function' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'deprecated-str-translate-call' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'deprecated-itertools-function' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'deprecated-types-field' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'next-method-defined' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'dict-items-not-iterating' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'dict-keys-not-iterating' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'dict-values-not-iterating' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'deprecated-operator-function' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'deprecated-urllib-function' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'xreadlines-attribute' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'deprecated-sys-function' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'exception-escape' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Useless option value for '--disable', 'comprehension-escape' was removed from pylint, see https://github.com/PyCQA/pylint/pull/4942.

Unknown option value for '--disable', expected a valid pylint message and got 'long-suffix'

Unknown option value for '--disable', expected a valid pylint message and got 'old-ne-operator'

Unknown option value for '--disable', expected a valid pylint message and got 'old-octal-literal'

Unknown option value for '--disable', expected a valid pylint message and got 'non-ascii-bytes-literal'

Unknown option value for '--disable', expected a valid pylint message and got 'eq-without-hash'

Module name "cleanData" doesn't conform to snake_case naming style

Too many arguments (13/5)

Too many local variables (29/15)

Too many branches (38/12)

Too many statements (95/50)

Too many nested blocks (6/5)

Too many nested blocks (6/5)

Too many nested blocks (6/5)

Module name "customPlot" doesn't conform to snake_case naming style

Unused import os

Unable to import 'matplotlib'

Unable to import 'matplotlib.pyplot'

Unable to import 'numpy'

Unable to import 'pandas'

Too many arguments (16/5)

Too many local variables (19/15)

Argument name "x" doesn't conform to snake_case naming style

Argument name "y" doesn't conform to snake_case naming style

Trailing whitespace

Variable name "ax" doesn't conform to snake_case naming style

Consider using enumerate instead of iterating with range and len

Module name "defaultDict" doesn't conform to snake_case naming style

Duplicate key 'date' in dictionary

Duplicate key 'Altersgruppe' in dictionary

Line too long (122/120)

Line too long (182/120)

Line too long (141/120)

Line too long (176/120)

Line too long (156/120)

Line too long (123/120)

Line too long (249/120)

Line too long (178/120)

Line too long (135/120)

Module name "geoModificationGermany" doesn't conform to snake_case naming style

Unable to import 'numpy'

Unable to import 'pandas'

Argument name "df" doesn't conform to snake_case naming style

Unnecessary "else" after "return", remove the "else" and de-indent the code inside it

Unnecessary use of a comprehension, use list(unique_geo_entities) instead.

Unnecessary "else" after "return", remove the "else" and de-indent the code inside it

Argument name "df" doesn't conform to snake_case naming style

Unnecessary "else" after "return", remove the "else" and de-indent the code inside it

Line too long (136/120)

Trailing whitespace

Trailing whitespace

Unnecessary "else" after "return", remove the "else" and de-indent the code inside it

Redefining built-in 'id'

Variable name "id" doesn't conform to snake_case naming style

Unnecessary "else" after "return", remove the "else" and de-indent the code inside it

Comparison 'strict == False' should be 'strict is False' if checking for the singleton value False, or 'not strict' if testing for falsiness

Variable name "p" doesn't conform to snake_case naming style

Consider using {} instead of dict()

Unnecessary parens after 'if' keyword

Using a conditional statement with a constant value

Unnecessary use of a comprehension, use list(range(len(intermed_regions))) instead.

Consider using enumerate instead of iterating with range and len

Unused variable 'intermedregionids_to_countyids'

Dangerous default value [] as argument

Too many arguments (6/5)

Argument name "df" doesn't conform to snake_case naming style

Consider changing "not dd.EngEng['idCounty'] in columns" to "dd.EngEng['idCounty'] not in columns"

Dangerous default value [] as argument

Argument name "df" doesn't conform to snake_case naming style

Module name "getCaseData" doesn't conform to snake_case naming style

Unable to import 'matplotlib.pyplot'

Unused matplotlib.pyplot imported as plt

Unable to import 'numpy'

Unable to import 'pandas'

Argument name "df" doesn't conform to snake_case naming style

Line too long (139/120)

Line too long (142/120)

Unnecessary "else" after "return", remove the "else" and de-indent the code inside it

Variable name "df" doesn't conform to snake_case naming style

Catching too general exception Exception

Unnecessary pass statement

Variable name "df" doesn't conform to snake_case naming style

No exception type(s) specified

Variable name "df" doesn't conform to snake_case naming style

No exception type(s) specified

Too many arguments (6/5)

Line too long (121/120)

Line too long (126/120)

Line too long (125/120)

Variable name "df" doesn't conform to snake_case naming style

Variable name "AnzahlFall" doesn't conform to snake_case naming style

Variable name "AnzahlGenesen" doesn't conform to snake_case naming style

Variable name "AnzahlTodesfall" doesn't conform to snake_case naming style

Consider explicitly re-raising using 'except Exception as exc' and 'raise gd.DataError("Time data can't be transformed to intended format") from exc'

Variable name "dateToUse" doesn't conform to snake_case naming style

Variable name "df" doesn't conform to snake_case naming style

Argument name "df" doesn't conform to snake_case naming style

Too many arguments (11/5)

Too many local variables (26/15)

Too many branches (14/12)

Either all return statements in a function should return an expression, or none of them should.

Line too long (123/120)

Line too long (140/120)

Line too long (185/120)

Line too long (139/120)

Line too long (140/120)

Line too long (127/120)

Consider merging these comparisons with 'in' by using 'files in ('All', ['All'])'. Use a set instead if elements are hashable.

Consider merging these comparisons with 'in' by using 'files in ('Plot', ['Plot'])'. Use a set instead if elements are hashable.

Variable name "Altersgruppe" doesn't conform to snake_case naming style

Variable name "Geschlecht" doesn't conform to snake_case naming style

Variable name "AnzahlFall" doesn't conform to snake_case naming style

Variable name "AnzahlGenesen" doesn't conform to snake_case naming style

Variable name "AnzahlTodesfall" doesn't conform to snake_case naming style

Variable name "IdBundesland" doesn't conform to snake_case naming style

Variable name "IdLandkreis" doesn't conform to snake_case naming style

Variable name "dateToUse" doesn't conform to snake_case naming style

Consider using {} instead of dict()

Consider iterating the dictionary directly instead of calling .keys()

The if statement can be replaced with 'var = bool(test)'

Too many arguments (10/5)

Too many local variables (17/15)

Either all return statements in a function should return an expression, or none of them should.

Line too long (121/120)

Line too long (123/120)

Line too long (135/120)

Line too long (135/120)

Line too long (135/120)

Line too long (121/120)

Module name "getCommuterMobility" doesn't conform to snake_case naming style

Unable to import 'numpy'

Unable to import 'pandas'

Unnecessary "else" after "return", remove the "else" and de-indent the code inside it

Too many local variables (16/15)

Comparison 'verify_sorted(countykey_list) == False' should be 'verify_sorted(countykey_list) is False' if checking for the singleton value False, or 'not verify_sorted(countykey_list)' if testing for falsiness

Line too long (184/120)

Consider using enumerate instead of iterating with range and len

Consider using enumerate instead of iterating with range and len

Consider using enumerate instead of iterating with range and len

Too many local variables (58/15)

Too many branches (40/12)

Too many statements (140/50)

Line too long (121/120)

Consider using enumerate instead of iterating with range and len

Line too long (142/120)

Variable name "p" doesn't conform to snake_case naming style

Consider using enumerate instead of iterating with range and len

Too many nested blocks (7/5)

Too many nested blocks (7/5)

Too many nested blocks (7/5)

Too many nested blocks (7/5)

Too many nested blocks (8/5)

Too many nested blocks (8/5)

Line too long (122/120)

Consider using enumerate instead of iterating with range and len

Line too long (132/120)

Line too long (132/120)

Line too long (121/120)

Line too long (121/120)

Too many boolean expressions in if statement (8/5)

Line too long (124/120)

Missing function or method docstring

Argument name "df" doesn't conform to snake_case naming style

Too many arguments (7/5)

Trailing whitespace

Trailing whitespace

Trailing whitespace

Trailing whitespace

Too many arguments (6/5)

Trailing whitespace

Trailing whitespace

Trailing whitespace

Redefining built-in 'id'

Variable name "id" doesn't conform to snake_case naming style

Module name "getDIVIData" doesn't conform to snake_case naming style

Unable to import 'pandas'

Line too long (122/120)

Too many arguments (6/5)

Line too long (126/120)

Line too long (187/120)

Variable name "df" doesn't conform to snake_case naming style

Consider explicitly re-raising using 'except BaseException as exc' and 'raise gd.DataError("Time data can't be transformed to intended format") from exc'

Variable name "df" doesn't conform to snake_case naming style

Variable name "df" doesn't conform to snake_case naming style

Argument name "df" doesn't conform to snake_case naming style

Too many arguments (6/5)

Line too long (140/120)

Line too long (188/120)

Too many arguments (7/5)

Trailing whitespace

Line too long (135/120)

Argument name "df" doesn't conform to snake_case naming style

Module name "getDataIntoPandasDataFrame" doesn't conform to snake_case naming style

standard import "import warnings" should be placed before "import requests"

Unable to import 'matplotlib'

standard import "from io import BytesIO" should be placed before "import requests"

standard import "from zipfile import ZipFile" should be placed before "import requests"

standard import "from enum import Enum" should be placed before "import requests"

Unable to import 'pandas'

Missing class docstring

Class constant name "Off" doesn't conform to UPPER_CASE naming style

Class constant name "Critical" doesn't conform to UPPER_CASE naming style

Class constant name "Error" doesn't conform to UPPER_CASE naming style

Class constant name "Warning" doesn't conform to UPPER_CASE naming style

Class constant name "Info" doesn't conform to UPPER_CASE naming style

Class constant name "Debug" doesn't conform to UPPER_CASE naming style

Class constant name "Trace" doesn't conform to UPPER_CASE naming style

Too few public methods (0/2)

Consider iterating the dictionary directly instead of calling .keys()

The if expression can be replaced with 'test'

The if expression can be replaced with 'test'

The if expression can be replaced with 'test'

The if expression can be replaced with 'test'

The if expression can be replaced with 'test'

The if expression can be replaced with 'test'

Consider iterating the dictionary directly instead of calling .keys()

Consider iterating the dictionary directly instead of calling .keys()

Consider iterating the dictionary directly instead of calling .keys()

Consider iterating the dictionary directly instead of calling .keys()

Consider iterating the dictionary directly instead of calling .keys()

Consider iterating the dictionary directly instead of calling .keys()

Consider iterating the dictionary directly instead of calling .keys()

Comparison 'Conf.show_progr == True' should be 'Conf.show_progr is True' if checking for the singleton value True, or 'Conf.show_progr' if testing for truthiness

Missing function or method docstring

Missing function or method docstring

Unused argument 'default'

Unnecessary "elif" after "return", remove the leading "el" from "elif"

Consider explicitly re-raising using 'except OSError as exc' and 'raise FileNotFoundError('Error: URL ' + url + ' could not be opened.') from exc'

Variable name "zipObj" doesn't conform to snake_case naming style

Consider using enumerate instead of iterating with range and len

No exception type(s) specified

Dangerous default value {} as argument

Too many local variables (19/15)

Too many branches (14/12)

Line too long (128/120)

Variable name "df" doesn't conform to snake_case naming style

Variable name "df" doesn't conform to snake_case naming style

Consider explicitly re-raising using 'except FileNotFoundError as exc' and 'raise FileNotFoundError(error_message) from exc'

Variable name "p" doesn't conform to snake_case naming style

Variable name "df" doesn't conform to snake_case naming style

Consider explicitly re-raising using 'except OSError as exc' and 'raise FileNotFoundError('Error: URL ' + url + ' could not be opened.') from exc'

Consider merging these isinstance calls to isinstance(df, (dict, list))

Consider explicitly re-raising using 'except AttributeError as exc' and 'raise DataError('Error: Dataframe is empty.') from exc'

Consider explicitly re-raising using 'except AttributeError as exc' and 'raise DataError('Could not catch type of df: ' + str(type(df))) from exc'

Too many branches (20/12)

Too many statements (52/50)

Line too long (154/120)

Line too long (138/120)

Line too long (131/120)

Line too long (129/120)

Line too long (173/120)

Consider explicitly re-raising using 'except KeyError as exc' and 'raise ValueError('Wrong key or cli_dict.') from exc'

Line too long (128/120)

Argument name "df" doesn't conform to snake_case naming style

Dangerous default value {} as argument

Variable name "outForm" doesn't conform to snake_case naming style

Variable name "outFormEnd" doesn't conform to snake_case naming style

Variable name "outFormSpec" doesn't conform to snake_case naming style

Consider explicitly re-raising using 'except KeyError as exc' and 'raise ValueError('Error: The file format: ' + file_type + ' does not exist. Use json, json_timeasstring, hdf5, csv or txt.') from exc'

Unnecessary pass statement

Module name "getHospitalizationData" doesn't conform to snake_case naming style

Unable to import 'numpy'

Unable to import 'pandas'

Argument name "df" doesn't conform to snake_case naming style

Unnecessary parens after 'if' keyword

Too many branches (17/12)

Line too long (132/120)

Too many nested blocks (6/5)

Too many nested blocks (6/5)

Consider using enumerate instead of iterating with range and len

Too many arguments (7/5)

Too many local variables (27/15)

Unused argument 'moving_average'

Line too long (135/120)

Line too long (127/120)

Line too long (168/120)

Comparison 'conf.checks == True' should be 'conf.checks is True' if checking for the singleton value True, or 'conf.checks' if testing for truthiness

Module name "getJHData" doesn't conform to snake_case naming style

Unable to import 'pandas'

Too many arguments (6/5)

Too many local variables (26/15)

Unused argument 'impute_dates'

Line too long (156/120)

Line too long (127/120)

Variable name "df" doesn't conform to snake_case naming style

Variable name "df" doesn't conform to snake_case naming style

Variable name "gb" doesn't conform to snake_case naming style

Consider iterating with .items()

Variable name "dfD" doesn't conform to snake_case naming style

Variable name "gb" doesn't conform to snake_case naming style

Too many lines in module (1501/1000)

Missing module docstring

Module name "getNPIData" doesn't conform to snake_case naming style

standard import "from datetime import date, datetime, timedelta" should be placed before "from memilio.epidata import getPopulationData as gpd"

standard import "import time" should be placed before "from memilio.epidata import getPopulationData as gpd"

standard import "import os" should be placed before "from memilio.epidata import getPopulationData as gpd"

standard import "import copy" should be placed before "from memilio.epidata import getPopulationData as gpd"

Unable to import 'pandas'

third party import "import pandas as pd" should be placed before "from memilio.epidata import getPopulationData as gpd"

Unable to import 'numpy'

third party import "import numpy as np" should be placed before "from memilio.epidata import getPopulationData as gpd"

standard import "import warnings" should be placed before "import pandas as pd"

Unable to import 'matplotlib'

third party import "import matplotlib as mpl" should be placed before "from memilio.epidata import getPopulationData as gpd"

Unable to import 'matplotlib.pyplot'

third party import "import matplotlib.pyplot as plt" should be placed before "from memilio.epidata import getPopulationData as gpd"

Argument name "countyID" doesn't conform to snake_case naming style

Argument name "npiCode" doesn't conform to snake_case naming style

Too many arguments (10/5)

Too many local variables (22/15)

Variable name "npiCodes" doesn't conform to snake_case naming style

Variable name "npiCodes" doesn't conform to snake_case naming style

Redefining argument with the local name 'npiCode'

Line too long (128/120)

Too many local variables (20/15)

Too many branches (21/12)

Too many statements (59/50)

Too many nested blocks (6/5)

Line too long (133/120)

Consider explicitly re-raising using 'except FileNotFoundError as exc' and 'raise FileNotFoundError from exc'

Consider explicitly re-raising using 'except FileNotFoundError as exc' and 'raise FileNotFoundError from exc'

Consider explicitly re-raising using 'except FileNotFoundError as exc' and 'raise FileNotFoundError from exc'

Consider explicitly re-raising using 'except FileNotFoundError as exc' and 'raise FileNotFoundError('File ' + fname + ' not found.') from exc'

Trailing whitespace

Trailing whitespace

Line too long (134/120)

Too many branches (14/12)

Consider using enumerate instead of iterating with range and len

Missing function or method docstring

Line too long (137/120)

Unnecessary parens after 'not' keyword

Unnecessary parens after 'not' keyword

Unnecessary parens after 'not' keyword

Too many arguments (8/5)

Too many local variables (122/15)

Too many branches (96/12)

Too many statements (308/50)

Comparison 'df_npis_old.columns.str.contains('d2') == True' should be 'df_npis_old.columns.str.contains('d2') is True' if checking for the singleton value True, or 'bool(df_npis_old.columns.str.contains('d2'))' if testing for truthiness

Comparison '(df_npis_combinations_pre == 'x').any() == True' should be '(df_npis_combinations_pre == 'x').any() is True' if checking for the singleton value True, or 'bool((df_npis_combinations_pre == 'x').any())' if testing for truthiness

Unnecessary use of a comprehension, use list(columns_used) instead.

Unnecessary use of a comprehension, use list(range(0, len(columns_used))) instead.

Consider using enumerate instead of iterating with range and len

Line too long (145/120)

Consider using enumerate instead of iterating with range and len

Unnecessary use of a comprehension, use list(npi_codes_prior_desc[npi_codes_prior.isin(codes_local)].values) instead.

Comparison 'write_file == False' should be 'write_file is False' if checking for the singleton value False, or 'not write_file' if testing for falsiness

Consider using enumerate instead of iterating with range and len

Consider changing "not errors == [0, 1, 2, 3, 4, 5]" to "errors != [0, 1, 2, 3, 4, 5]"

Line too long (123/120)

Consider using {} instead of dict()

Consider iterating the dictionary directly instead of calling .keys()

Consider using {} instead of dict()

Consider changing "not (threshold, '') in incidence_thresholds" to "(threshold, '') not in incidence_thresholds"

Consider changing "not (threshold, '_' + code.split('_')[2]) in incidence_thresholds" to "(threshold, '_' + code.split('_')[2]) not in incidence_thresholds"

Variable name "countyID" doesn't conform to snake_case naming style

Too many nested blocks (7/5)

Use a generator instead 'all(npis[dd.EngEng['npiCode']][i * inc_codes] in npi_code_test for npi_code_test in df_local_old.iloc[inc_codes * i:inc_codes * (i + 1), npi_start_col - 1].to_list())'

Unnecessary parens after 'if' keyword

Variable name "countyID" doesn't conform to snake_case naming style

Variable name "npiCode" doesn't conform to snake_case naming style

Variable name "a" doesn't conform to snake_case naming style

Variable name "b" doesn't conform to snake_case naming style

Unused variable 'oldf'

Unused variable 'newf'

Unnecessary parens after 'if' keyword

Trailing whitespace

Trailing whitespace

Comparison 'df_local.columns.str.startswith('d2') == True' should be 'df_local.columns.str.startswith('d2') is True' if checking for the singleton value True, or 'bool(df_local.columns.str.startswith('d2'))' if testing for truthiness

Consider using enumerate instead of iterating with range and len

Line too long (161/120)

Consider using enumerate instead of iterating with range and len

Too many statements (54/50)

Trailing whitespace

Consider explicitly re-raising using 'except FileNotFoundError as exc' and 'raise FileNotFoundError('File ' + filename + ' not found.') from exc'

Variable name "df" doesn't conform to snake_case naming style

Unnecessary use of a comprehension, use list(range(len(df.columns) - 1)) instead.

Formatting a regular string which could be a f-string

Unnecessary use of a comprehension, use list(range(len(df.columns) - 1)) instead.

Formatting a regular string which could be a f-string

Variable name "df" doesn't conform to snake_case naming style

Unused variable 'df'

Module name "getPopulationData" doesn't conform to snake_case naming style

Unused import warnings

standard import "import os" should be placed before "import requests"

standard import "import io" should be placed before "import requests"

Unable to import 'numpy'

Unable to import 'pandas'

Line too long (137/120)

Missing timeout argument for method 'requests.get' can cause your program to hang indefinitely

Line too long (121/120)

Missing timeout argument for method 'requests.get' can cause your program to hang indefinitely

Unused argument 'merge_eisenach'

Argument name "idCounty_idx" doesn't conform to snake_case naming style

Trailing whitespace

Trailing whitespace

Comparison 'read_data == True' should be 'read_data is True' if checking for the singleton value True, or 'read_data' if testing for truthiness

Comparison 'df_pop_raw[dd.EngEng['idCounty']].str.contains('__') == True' should be 'df_pop_raw[dd.EngEng['idCounty']].str.contains('__') is True' if checking for the singleton value True, or 'bool(df_pop_raw[dd.EngEng['idCounty']].str.contains('__'))' if testing for truthiness

Variable name "idCounty_idx" doesn't conform to snake_case naming style

Consider using enumerate instead of iterating with range and len

Trailing whitespace

Trailing whitespace

Trailing whitespace

Trailing whitespace

Trailing whitespace

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Trailing whitespace

Trailing whitespace

Module name "getSimulationData" doesn't conform to snake_case naming style

Missing function or method docstring

Too many arguments (10/5)

Too many local variables (20/15)

Line too long (135/120)

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Line too long (135/120)

Line too long (145/120)

Catching too general exception Exception

Catching too general exception Exception

Catching too general exception Exception

Catching too general exception Exception

Missing module docstring

Module name "getTestingData" doesn't conform to snake_case naming style

Unable to import 'pandas'

Trailing whitespace

Trailing whitespace

Line too long (144/120)

Instance of 'list' has no 'iloc' member

Variable name "r" doesn't conform to snake_case naming style

Missing timeout argument for method 'requests.get' can cause your program to hang indefinitely

Variable name "fh" doesn't conform to snake_case naming style

Variable name "df" doesn't conform to snake_case naming style

Trailing whitespace

Too many arguments (7/5)

Too many local variables (26/15)

Too many statements (70/50)

Trailing whitespace

Trailing whitespace

Trailing whitespace

Trailing whitespace

Trailing whitespace

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Line too long (135/120)

Consider explicitly re-raising using 'except (ValueError, FileNotFoundError) as exc' and 'raise FileNotFoundError('Error: The file: ' + county_file_in + ' does not exist. Call program without -r flag to get it.') from exc'

Consider explicitly re-raising using 'except (ValueError, FileNotFoundError) as exc' and 'raise FileNotFoundError('Error: The file: ' + state_file_in + ' does not exist. Call program without -r flag to get it.') from exc'

Instance of 'list' has no 'rename' member

Instance of 'list' has no 'rename' member

Sequence index is not an int, slice, or instance with __index__

Sequence index is not an int, slice, or instance with __index__

Sequence index is not an int, slice, or instance with __index__

Sequence index is not an int, slice, or instance with __index__

Sequence index is not an int, slice, or instance with __index__

Sequence index is not an int, slice, or instance with __index__

Sequence index is not an int, slice, or instance with __index__

Sequence index is not an int, slice, or instance with __index__

Consider explicitly re-raising using 'except Exception as exc' and 'raise gd.DataError("Time data can't be transformed to intended format") from exc'

Instance of 'list' has no 'drop' member

Instance of 'list' has no 'drop' member

Instance of 'list' has no 'State' member

Instance of 'list' has no 'reset_index' member

Instance of 'list' has no 'rename' member

Variable name "stateName" doesn't conform to snake_case naming style

Variable name "stateID" doesn't conform to snake_case naming style

Instance of 'list' has no 'loc' member

Sequence index is not an int, slice, or instance with __index__

Sequence index is not an int, slice, or instance with __index__

Sequence index is not an int, slice, or instance with __index__

Unnecessary use of a comprehension, use list(geoger.get_state_ids()) instead.

Sequence index is not an int, slice, or instance with __index__

Instance of 'list' has no 'loc' member

Sequence index is not an int, slice, or instance with __index__

Unnecessary use of a comprehension, use list(geoger.get_state_names()) instead.

Instance of 'list' has no 'loc' member

Sequence index is not an int, slice, or instance with __index__

Too many lines in module (1274/1000)

Missing module docstring

Module name "getVaccinationData" doesn't conform to snake_case naming style

Unable to import 'numpy'

Unable to import 'pandas'

Missing function or method docstring

Line too long (153/120)

Missing function or method docstring

Argument name "df" doesn't conform to snake_case naming style

Unnecessary parens after 'if' keyword

Too many arguments (6/5)

Argument name "df" doesn't conform to snake_case naming style

Too many local variables (38/15)

Too many branches (14/12)

Too many statements (60/50)

Argument name "df" doesn't conform to snake_case naming style

Line too long (154/120)

Line too long (174/120)

Line too long (123/120)

Variable name "kk" doesn't conform to snake_case naming style

Consider iterating with .items()

Variable name "ii" doesn't conform to snake_case naming style

Line too long (161/120)

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Line too long (127/120)

Line too long (173/120)

Unnecessary use of a comprehension, use list(age_groups) instead.

Variable name "ii" doesn't conform to snake_case naming style

Redefining built-in 'id'

Variable name "id" doesn't conform to snake_case naming style

Consider using enumerate instead of iterating with range and len

Line too long (123/120)

Line too long (126/120)

Comparison 'np.isnan(df_san[column_names]) == True' should be 'np.isnan(df_san[column_names]) is True' if checking for the singleton value True, or 'bool(np.isnan(df_san[column_names]))' if testing for truthiness

Variable name "id" doesn't conform to snake_case naming style

Variable name "a" doesn't conform to snake_case naming style

Variable name "b" doesn't conform to snake_case naming style

Too many arguments (8/5)

Too many local variables (23/15)

Line too long (121/120)

Consider using enumerate instead of iterating with range and len

Variable name "countyID" doesn't conform to snake_case naming style

Consider using enumerate instead of iterating with range and len

Consider using enumerate instead of iterating with range and len

Line too long (168/120)

Line too long (121/120)

Unused variable 'out_folder'

Too many arguments (8/5)

Too many local variables (49/15)

Too many branches (41/12)

Too many statements (129/50)

Consider explicitly re-raising using 'except Exception as exc' and 'raise gd.DataError("Time data can't be transformed to intended format") from exc'

Line too long (125/120)

Line too long (142/120)

Line too long (125/120)

Consider using enumerate instead of iterating with range and len

Consider using enumerate instead of iterating with range and len

Consider using enumerate instead of iterating with range and len

Consider using enumerate instead of iterating with range and len

Consider using enumerate instead of iterating with range and len

Consider merging these comparisons with 'in' by using 'sanitize_data in (1, 2)'. Use a set instead if elements are hashable.

Too many arguments (6/5)

Too many local variables (34/15)

Too many statements (70/50)

Line too long (142/120)

Line too long (190/120)

Line too long (139/120)

Line too long (122/120)

Line too long (143/120)

Line too long (144/120)

Unused variable 'df_fullsum'

Unnecessary use of a comprehension, use list(unique_age_groups_old) instead.

Unnecessary use of a comprehension, use list(unique_age_groups_old) instead.

Unused variable 'df_fullsum_county'

Unused variable 'df_fullsum_state'

Unnecessary use of a comprehension, use list(unique_age_groups_new) instead.

Unnecessary use of a comprehension, use list(unique_age_groups_new) instead.

Unnecessary "else" after "return", remove the "else" and de-indent the code inside it

Too many arguments (8/5)

Either all return statements in a function should return an expression, or none of them should.

Line too long (140/120)

Module name "modifyDataframeSeries" doesn't conform to snake_case naming style

Unable to import 'numpy'

Unable to import 'pandas'

Too many arguments (8/5)

Too many local variables (24/15)

Too many branches (25/12)

Too many statements (79/50)

Line too long (153/120)

Line too long (127/120)

Line too long (127/120)

Line too long (141/120)

Comparison 'isinstance(first_date, str) == True' should be 'isinstance(first_date, str) is True' if checking for the singleton value True, or 'isinstance(first_date, str)' if testing for truthiness

Comparison 'isinstance(last_date, str) == True' should be 'isinstance(last_date, str) is True' if checking for the singleton value True, or 'isinstance(last_date, str)' if testing for truthiness

No exception type(s) specified

Comparison 'isinstance(min_date, str) == True' should be 'isinstance(min_date, str) is True' if checking for the singleton value True, or 'isinstance(min_date, str)' if testing for truthiness

Comparison 'isinstance(max_date, str) == True' should be 'isinstance(max_date, str) is True' if checking for the singleton value True, or 'isinstance(max_date, str)' if testing for truthiness

No exception type(s) specified

Consider using 'first_date = min(first_date, min_date_to_use)' instead of unnecessary if block

Consider using 'last_date = max(last_date, max_date_to_use)' instead of unnecessary if block

Too many arguments (6/5)

Line too long (146/120)

Line too long (139/120)

Consider using enumerate instead of iterating with range and len

Argument name "df" doesn't conform to snake_case naming style

Argument name "df" doesn't conform to snake_case naming style

Redefining built-in 'map'

Unnecessary parens after 'if' keyword

Unnecessary parens after 'if' keyword

Unnecessary "else" after "continue", remove the "else" and de-indent the code inside it

Too many local variables (27/15)

Too many branches (35/12)

Too many statements (95/50)

Line too long (125/120)

Line too long (132/120)

Trailing whitespace

Line too long (131/120)

Line too long (140/120)

Line too long (145/120)

Missing module docstring

Too many instance attributes (8/7)

Unnecessary parens after 'assert' keyword

Import outside toplevel (ctypes.windll)

Unnecessary parens after 'except' keyword

Too many arguments (6/5)

Unnecessary parens after 'assert' keyword

Variable name "n" doesn't conform to snake_case naming style

Too many arguments (6/5)

Variable name "w" doesn't conform to snake_case naming style

Variable name "n" doesn't conform to snake_case naming style

Missing module docstring

Module name "transformMobilityData" doesn't conform to snake_case naming style

Unable to import 'numpy'

Unable to import 'pandas'

Unused defaultDict imported from memilio.epidata as dd

Function name "getMobilityFromFile" doesn't conform to snake_case naming style

Function name "createFederalStatesMobility" doesn't conform to snake_case naming style

Line too long (135/120)

Unnecessary "else" after "return", remove the "else" and de-indent the code inside it

Variable name "countyIDs" doesn't conform to snake_case naming style

Variable name "stateIDs" doesn't conform to snake_case naming style

Variable name "stateID_to_countyID" doesn't conform to snake_case naming style

Function name "updateMobility2022" doesn't conform to snake_case naming style

Unnecessary "else" after "return", remove the "else" and de-indent the code inside it

Missing module docstring

Module name "transformWeatherData" doesn't conform to snake_case naming style

Similar lines in 2 files
==memilio.epidata.getJHData:[97:106]
==memilio.epidata_test.test_epidata_get_jh_data:[122:129]
    directory_ger = os.path.join(out_folder, 'Germany/')
    directory_es = os.path.join(out_folder, 'Spain/')
    directory_fr = os.path.join(out_folder, 'France/')
    directory_it = os.path.join(out_folder, 'Italy/')
    directory_us = os.path.join(out_folder, 'US/')
    directory_rok = os.path.join(out_folder, 'SouthKorea/')
    directory_prc = os.path.join(out_folder, 'China/')

    # dictionary of countries

Similar lines in 2 files
==memilio.epidata.getCommuterMobility:[25:32]
==memilio.epidata.transformMobilityData:[19:29]
import os
import numpy as np
import pandas as pd

from memilio.epidata import defaultDict as dd
from memilio.epidata import geoModificationGermany as geoger
from memilio.epidata import getDataIntoPandasDataFrame as gd

Similar lines in 2 files
==memilio.epidata.getCaseData:[36:43]
==memilio.epidata.transformWeatherData:[23:32]
import numpy as np
import pandas as pd

from memilio.epidata import defaultDict as dd
from memilio.epidata import geoModificationGermany as geoger
from memilio.epidata import getDataIntoPandasDataFrame as gd
from memilio.epidata import modifyDataframeSeries as mdfs

Similar lines in 2 files
==memilio.epidata.getCaseData:[238:244]
==memilio.epidata.getDIVIData:[141:147]
    try:
        df[dd.EngEng['date']] = pd.to_datetime(
            df[dd.EngEng['date']], format="ISO8601")
    except ValueError:
        try:
            df[dd.EngEng['date']] = pd.to_datetime(

Similar lines in 2 files
==memilio.epidata.getPopulationData:[30:48]
==memilio.epidata.transformMobilityData:[21:40]
import numpy as np
import pandas as pd

from memilio.epidata import defaultDict as dd
from memilio.epidata import geoModificationGermany as geoger
from memilio.epidata import getDataIntoPandasDataFrame as gd

# activate CoW for more predictable behaviour of pandas DataFrames
pd.options.mode.copy_on_write = True


def read_population_data(ref_year):
    """! Reads Population data from regionalstatistik.de

    A request is made to regionalstatistik.de and the StringIO is read in as a csv into the dataframe format.
    @param ref_year [Default: None] or year (jjjj) convertible to str. Reference year.
    @return DataFrame
    """

Similar lines in 2 files
==memilio.epidata_test.test_epidata_getCaseData:[22:30]
==memilio.epidata_test.test_epidata_get_jh_data:[20:28]
import unittest
from datetime import date, datetime
from unittest.mock import patch

import pandas as pd
from pyfakefs import fake_filesystem_unittest

from memilio.epidata import defaultDict as dd

Similar lines in 2 files
==memilio.epidata_test.test_epidata_getHospitalizationData:[103:109]
==memilio.epidata_test.test_epidata_get_divi_data:[217:223]
        df = pd.DataFrame(
            {'date_fake': [1, 2, 3],
             '6': [6, 7, 8],
             '7': [7, 8, 9],
             '8': [8, 9, 0],
             'bundesland': [2, 3, 4],

Similar lines in 2 files
==memilio.epidata.getTestingData:[27:46]
==memilio.epidata.transformWeatherData:[26:57]
from memilio.epidata import defaultDict as dd
from memilio.epidata import geoModificationGermany as geoger
from memilio.epidata import getDataIntoPandasDataFrame as gd
from memilio.epidata import modifyDataframeSeries as mdfs

# activate CoW for more predictable behaviour of pandas DataFrames
pd.options.mode.copy_on_write = True

# Downloads testing data from RKI


def download_testing_data():
    """! Downloads the Sars-CoV-2 test data sets from RKI on country
    and federal state level. Information on federal state level do not sum
    up to country-wide information since less laboratories are participating.

    @return dataframe array with country level information first and
        federal state level second
    """

Similar lines in 2 files
==memilio.epidata.getCommuterMobility:[26:32]
==memilio.epidata.transformWeatherData:[23:29]
import numpy as np
import pandas as pd

from memilio.epidata import defaultDict as dd
from memilio.epidata import geoModificationGermany as geoger
from memilio.epidata import getDataIntoPandasDataFrame as gd

Similar lines in 2 files
==memilio.epidata.getCaseData:[37:43]
==memilio.epidata.getDIVIData:[41:74]
import pandas as pd

from memilio.epidata import defaultDict as dd
from memilio.epidata import geoModificationGermany as geoger
from memilio.epidata import getDataIntoPandasDataFrame as gd
from memilio.epidata import modifyDataframeSeries as mdfs


def fetch_divi_data(
        directory: str,
        filename: str,
        conf_obj,
        read_data: bool = dd.defaultDict['read_data'],
        file_format: str = dd.defaultDict['file_format'],
) -> pd.DataFrame:
    """! Downloads or reads the DIVI ICU data and writes them in different files.

    If it does not already exist, the folder Germany is generated in the given out_folder.
    If read_data == True and the file "FullData_DIVI.json" exists, the data is read form this file
    and stored in a pandas dataframe. If read_data = True and the file does not exist the program is stopped.
    The downloaded dataframe is written to the file "FullData_DIVI".

    @param directory str
        Path to the output directory
    @param conf_obj
        configuration object
    @param filename str
        File format which is used for writing the data. Default defined in defaultDict.
    @param read_data bool. True or False. Defines if data is read from file or downloaded. Default defined in defaultDict.
    @param file_format str. File format which is used for writing the data. Default defined in defaultDict.

    @return Tuple[df_raw, start_date] Tuple. Contains the fetched data as well as the adjusted starting date
    """

Similar lines in 2 files
==memilio.epidata.getJHData:[31:69]
==memilio.epidata.transformWeatherData:[28:60]
from memilio.epidata import getDataIntoPandasDataFrame as gd
from memilio.epidata import modifyDataframeSeries as mdfs

# activate CoW for more predictable behaviour of pandas DataFrames
pd.options.mode.copy_on_write = True


def get_jh_data(read_data=dd.defaultDict['read_data'],
                file_format=dd.defaultDict['file_format'],
                out_folder=dd.defaultDict['out_folder'],
                start_date=date(2020, 1, 22),
                end_date=dd.defaultDict['end_date'],
                impute_dates=dd.defaultDict['impute_dates'],
                **kwargs):
    """! Download data from John Hopkins University

   Data is either downloaded and afterwards stored or loaded from a stored filed.
   The file is "FullData_JohnHopkins.json"

   Working with the data includes
   - rename columns such that "/" is deleted, e.g Country/Region becomes CountryRegion
   - data of all countries together are written to a file
   - download the data from following countries in a separate file
   and are stored in the according folders with the country name
       - Germany, SouthKorea, Spain, France, Italy, US, China
   - furthermore, all countries, for which provinces are added, are written to a file

    @param read_data True or False. Defines if data is read from file or downloaded. Default defined in defaultDict.
    @param file_format File format which is used for writing the data. Default defined in defaultDict.
    @param out_folder Folder where data is written to. Default defined in defaultDict.
    @param start_date Date of first date in dataframe. Default defined in defaultDict.
    @param end_date Date of last date in dataframe. Default defined in defaultDict.
    @param impute_dates [Currently not used] True or False. Defines if values for dates without new information are imputed. Default defined in defaultDict.
    @param moving_average [Currently not used] Integers >=0. Applies an 'moving_average'-days moving average on all time series
        to smooth out effects of irregular reporting. Default defined in defaultDict.
   """
    conf = gd.Conf(out_folder, **kwargs)
    out_folder = conf.path_to_use

Similar lines in 2 files
==memilio.epidata.getHospitalizationData:[32:51]
==memilio.epidata.getJHData:[28:67]
import pandas as pd

from memilio.epidata import defaultDict as dd
from memilio.epidata import getDataIntoPandasDataFrame as gd
from memilio.epidata import modifyDataframeSeries as mdfs

# activate CoW for more predictable behaviour of pandas DataFrames
pd.options.mode.copy_on_write = True


def get_jh_data(read_data=dd.defaultDict['read_data'],
                file_format=dd.defaultDict['file_format'],
                out_folder=dd.defaultDict['out_folder'],
                start_date=date(2020, 1, 22),
                end_date=dd.defaultDict['end_date'],
                impute_dates=dd.defaultDict['impute_dates'],
                **kwargs):
    """! Download data from John Hopkins University

   Data is either downloaded and afterwards stored or loaded from a stored filed.
   The file is "FullData_JohnHopkins.json"

   Working with the data includes
   - rename columns such that "/" is deleted, e.g Country/Region becomes CountryRegion
   - data of all countries together are written to a file
   - download the data from following countries in a separate file
   and are stored in the according folders with the country name
       - Germany, SouthKorea, Spain, France, Italy, US, China
   - furthermore, all countries, for which provinces are added, are written to a file

    @param read_data True or False. Defines if data is read from file or downloaded. Default defined in defaultDict.
    @param file_format File format which is used for writing the data. Default defined in defaultDict.
    @param out_folder Folder where data is written to. Default defined in defaultDict.
    @param start_date Date of first date in dataframe. Default defined in defaultDict.
    @param end_date Date of last date in dataframe. Default defined in defaultDict.
    @param impute_dates [Currently not used] True or False. Defines if values for dates without new information are imputed. Default defined in defaultDict.
    @param moving_average [Currently not used] Integers >=0. Applies an 'moving_average'-days moving average on all time series
        to smooth out effects of irregular reporting. Default defined in defaultDict.
   """

Similar lines in 2 files
==memilio.epidata.getCaseData:[36:42]
==memilio.epidata.getPopulationData:[30:38]
import numpy as np
import pandas as pd

from memilio.epidata import defaultDict as dd
from memilio.epidata import geoModificationGermany as geoger
from memilio.epidata import getDataIntoPandasDataFrame as gd

# activate CoW for more predictable behaviour of pandas DataFrames

Similar lines in 2 files
==memilio.epidata_test.test_epidata_get_vaccination_data:[24:30]
==memilio.epidata_test.test_epidata_transform_mobility_data:[23:29]
import numpy as np
import pandas as pd
from pyfakefs import fake_filesystem_unittest

from memilio.epidata import geoModificationGermany as geoger
from memilio.epidata import getDataIntoPandasDataFrame as gd

Similar lines in 2 files
==memilio.epidata_test.test_epidata_getCommuterMobility:[65:75]
==memilio.epidata_test.test_epidata_get_vaccination_data:[101:114]
    filename = os.path.join(
        here, 'test_data', 'TestSetPopulationFinal.json')
    with open(filename) as file_object:
        df_pop = pd.DataFrame(json.load(file_object))

    def setUp(self):
        self.setUpPyfakefs()

    @patch('memilio.epidata.getVaccinationData.download_vaccination_data',
           return_value=df_vacc_data_altern)
    @patch('memilio.epidata.getPopulationData.get_population_data', return_value=df_pop)
    @patch('memilio.epidata.getDataIntoPandasDataFrame.user_choice', return_value=True)
    def test_get_vaccination_data_alternative_ages(self, mockin, mockp, mockv):

Unable to import 'numpy'

Unable to import 'pandas'

Function name "transformWeatherData" doesn't conform to snake_case naming style

Too many arguments (8/5)

Too many local variables (31/15)

Too many branches (14/12)

Too many statements (55/50)

Unused argument 'start_date'

Unused argument 'end_date'

Trailing whitespace

Trailing whitespace

Consider using enumerate instead of iterating with range and len

Consider using enumerate instead of iterating with range and len

Variable name "countyID" doesn't conform to snake_case naming style

Too many lines in module (1133/1000)

Missing module docstring

Missing class docstring

Class name "Test_cleanData" doesn't conform to PascalCase naming style

Too many public methods (33/20)

Missing function or method docstring

Too many local variables (22/15)

Variable name "e" doesn't conform to snake_case naming style

Using open without explicitly specifying an encoding

Variable name "f" doesn't conform to snake_case naming style

Consider merging these comparisons with 'in' by using 'what in ('all', 'jh')'. Use a set instead if elements are hashable.

Variable name "e" doesn't conform to snake_case naming style

Using open without explicitly specifying an encoding

Variable name "f" doesn't conform to snake_case naming style

Missing function or method docstring

Redefining built-in 'dir'

Missing function or method docstring

Missing function or method docstring

Using open without explicitly specifying an encoding

Variable name "f" doesn't conform to snake_case naming style

Using open without explicitly specifying an encoding

Variable name "f" doesn't conform to snake_case naming style

Missing function or method docstring

Redefining built-in 'dir'

Missing function or method docstring

Redefining built-in 'dir'

Missing function or method docstring

Unnecessary "else" after "continue", remove the "else" and de-indent the code inside it

Consider merging these comparisons with 'in' by using 'item in ('cases_a.json', 'CaseDataFull.json')'. Use a set instead if elements are hashable.

Redefining built-in 'dir'

Missing function or method docstring

Redefining built-in 'dir'

Missing function or method docstring

Redefining built-in 'dir'

Missing function or method docstring

Unnecessary "else" after "continue", remove the "else" and de-indent the code inside it

Redefining built-in 'dir'

Missing function or method docstring

Redefining built-in 'dir'

Missing function or method docstring

Missing function or method docstring

Redefining built-in 'dir'

Missing function or method docstring

Redefining built-in 'dir'

Missing function or method docstring

Redefining built-in 'dir'

Missing function or method docstring

Using open without explicitly specifying an encoding

Variable name "f" doesn't conform to snake_case naming style

Missing function or method docstring

Using open without explicitly specifying an encoding

Variable name "f" doesn't conform to snake_case naming style

Missing function or method docstring

Using open without explicitly specifying an encoding

Variable name "f" doesn't conform to snake_case naming style